transcritptome dynamics in early zebrafish embryogenesis

TRANSCRITPTOME DYNAMICS IN EARLY ZEBRAFISH EMBRYOGENESIS
Introduction
Chapter 1 - RNA Isolation Method for Single Embryo Transcriptome Analysis in
Zebrafish.
Published:
de Jong M, Rauwerda H, Bruning O, Verkooijen J, Spaink HP, Breit TM. RNA isolation method for
single embryo transcriptome analysis in zebrafish. BMC Res Notes. 2010;3: 73. doi:10.1186/17560500-3-73
Chapter 2 - Integrating Heterogeneous Sequence Information for Transcriptome-wide
Microarray Design; a Zebrafish Example.
Published:
Rauwerda H, de Jong M, de Leeuw WC, Spaink HP, Breit TM. Integrating heterogeneous sequence
information for transcriptome-wide microarray design; a Zebrafish example. BMC Res Notes. 2010;3:
192. doi:10.1186/1756-0500-3-192
Chapter 3A - Mother-Specific Signature in the Maternal Transcriptome Composition of
Mature, Unfertilized Zebrafish Eggs.
Published:
Rauwerda H, Wackers P, Pagano JFB, de Jong M, Ensink W, Dekker R, et al. Mother-Specific Signature
in the Maternal Transcriptome Composition of Mature, Unfertilized Zebrafish Eggs. PLoS One. Public
Library of Science; 2016;11: e0147151. Available:
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0147151
Chapter 3B - Transcriptome Data on Maternal RNA of 24 Individual Zebrafish Eggs
from Five Sibling Mothers
Published:
H. Rauwerda*, J.F.B. Pagano*, W.C. de Leeuw, P. Wackers, M. de Jong, W. Ensink, R.Dekker, U.
Nehrdich, H.P. Spaink, M. Jonker, T.M. Breit. Transcriptome data on maternal RNA of 24 individual
zebrafish eggs from five sibling mothers. Data in Brief, Elsevier, April 2016
Chapter 4 - Transcriptome dynamics of early zebrafish embryogenesis determined by
high-resolution time series analysis
Submitted
Chapter 5 – Cellular Factors Involved in Transcriptome Dynamics in Early Zebrafish
Embryogenesis
Submitted
Chapter 6 – Concluding Remarks
Summary